It's been a year after the events of Trap Team. However, the relief does not last very long. The world of Skylands is in danger again, and it's because The Darkness and other villains, who have invaded this world to take the magic power of Skylanders and destroy the Academy. The Team decided to splits in two to train with each Skylanders group. Dante, Fei, Rob, Florian, Samara and Kira train with the Superchargers, while Ludger, Connie, Allister and Hikaru train with the senseis.